dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00002
Location and strand information: 1025 - 1942 (+)
Family: 3.A.1.1.28
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00003
Location and strand information: 1942 - 2874 (+)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00004
Location and strand information: 3027 - 4955 (+)
Family: GH13_31|GH13
Protein type: CAZyme
Protein description: Oligo-1,6-glucosidase
Protein isoelectric point: 4.7959
Protein molecular weight: 71887.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00005
Location and strand information: 5010 - 6026 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00006
Location and strand information: 6622 - 7530 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00007
Location and strand information: 7771 - 9279 (+)
Family: GH13_18|GH13
Protein type: CAZyme
Protein description: Sucrose phosphorylase
Protein isoelectric point: 4.605
Protein molecular weight: 55883.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00008
Location and strand information: 9424 - 9723 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00009
Location and strand information: 9747 - 11054 (+)
Family: 2.A.1.2.93
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00010
Location and strand information: 11160 - 11705 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00011
Location and strand information: 12626 - 14188 (+)
Family: 2.A.3.1.20
Protein type: TC
Protein description: Serine permease SerP1

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00012
Location and strand information: 14188 - 14613 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00013
Location and strand information: 14642 - 16108 (-)
Family: 2.A.3.1.3
Protein type: TC
Protein description: Aromatic amino acid transport protein AroP

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00014
Location and strand information: 16120 - 18048 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00015
Location and strand information: 18214 - 20025 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00016
Location and strand information: 20113 - 21009 (+)
Family: GT111
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.6835
Protein molecular weight: 34532.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00017
Location and strand information: 21099 - 23138 (+)
Family: 9.B.18.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00018
Location and strand information: 23325 - 24527 (+)
Family: ATPase_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00019
Location and strand information: 24561 - 27389 (+)
Family: CBM13|GH25
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.1825
Protein molecular weight: 99832.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00020
Location and strand information: 27402 - 28430 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator MalR

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00021
Location and strand information: 28639 - 29886 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00022
Location and strand information: 29947 - 31311 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002940_1|CGC1
Gene ID: MGYG000002940_00023
Location and strand information: 31617 - 31985 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002940_00004	GH13_e0\|5.4.99.11\|3.2.1.70\|3.2.1.20\|3.2.1.10\|3.2.1.-\|2.4.1.-	sucrose\|starch
MGYG000002940_00007	GH13_e50\|2.4.1.7	sucrose
MGYG000002940_00016
MGYG000002940_00019	GH25_e90\|CBM13_e168

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is sucrose

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002940_00002	Lactose transport system permease protein LacF	TC	1025	1942	+	3.A.1.1.28
MGYG000002940_00003	L-arabinose transport system permease protein AraQ	TC	1942	2874	+	3.A.1.1.28
MGYG000002940_00004	Oligo-1,6-glucosidase	CAZyme	3027	4955	+	GH13_31\| GH13
MGYG000002940_00005	hypothetical protein	null	5010	6026	-	No domain
MGYG000002940_00006	hypothetical protein	null	6622	7530	+	No domain
MGYG000002940_00007	Sucrose phosphorylase	CAZyme	7771	9279	+	GH13_18\| GH13
MGYG000002940_00008	hypothetical protein	null	9424	9723	+	No domain
MGYG000002940_00009	hypothetical protein	TC	9747	11054	+	2.A.1.2.93
MGYG000002940_00010	hypothetical protein	null	11160	11705	-	No domain
MGYG000002940_00011	Serine permease SerP1	TC	12626	14188	+	2.A.3.1.20
MGYG000002940_00012	hypothetical protein	null	14188	14613	+	RDD
MGYG000002940_00013	Aromatic amino acid transport protein AroP	TC	14642	16108	-	2.A.3.1.3
MGYG000002940_00014	hypothetical protein	null	16120	18048	-	No domain
MGYG000002940_00015	hypothetical protein	null	18214	20025	+	DUF4012
MGYG000002940_00016	hypothetical protein	CAZyme	20113	21009	+	GT111
MGYG000002940_00017	hypothetical protein	TC	21099	23138	+	9.B.18.1.2
MGYG000002940_00018	hypothetical protein	STP	23325	24527	+	ATPase_2
MGYG000002940_00019	hypothetical protein	CAZyme	24561	27389	+	CBM13\| GH25
MGYG000002940_00020	HTH-type transcriptional regulator MalR	TF	27402	28430	-	LacI
MGYG000002940_00021	hypothetical protein	STP	28639	29886	+	SBP_bac_1
MGYG000002940_00022	hypothetical protein	TC	29947	31311	+	3.A.1.1.36
MGYG000002940_00023	L-arabinose transport system permease protein AraQ	TC	31617	31985	+	3.A.1.1.36
Protein ID	Protein Name	Type	Start	End	Strand	Signature